Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2752 domain-containing protein | DF947_06355 | Not Available | Negative | 1452797 - 1453096 | 11480.1 |
| transcription-repair coupling factor | DF947_06360 | Not Available | Positive | 1453303 - 1456641 | 126345.0 |
| hypothetical protein | DF947_06365 | Not Available | Positive | 1456652 - 1456870 | 8428.6 |
| efflux rnd transporter periplasmic adaptor subunit | DF947_06370 | Not Available | Positive | 1457067 - 1458149 | 40266.6 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DF947_06375 | Not Available | Positive | 1458175 - 1461345 | 115472.0 |
| rnd transporter | DF947_06380 | Not Available | Positive | 1461338 - 1462771 | 53133.6 |
| disulfide bond formation protein dsba | DF947_06385 | Not Available | Negative | 1462872 - 1463588 | 27170.9 |
| hypothetical protein | DF947_06390 | Not Available | Positive | 1463815 - 1465713 | 71263.1 |
| peptidase | DF947_06395 | Not Available | Negative | 1465791 - 1468493 | 100625.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | DF947_06400 | Not Available | Positive | 1469089 - 1471422 | 88618.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

