Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid transfer protein | DF947_06205 | Not Available | Positive | 1427861 - 1428163 | 11338.0 |
| conjugal transfer protein | DF947_06210 | Not Available | Positive | 1428199 - 1428510 | 10683.2 |
| duf4133 domain-containing protein | DF947_06215 | Not Available | Positive | 1428510 - 1428821 | 11290.0 |
| conjugal transfer protein trag | DF947_06220 | Not Available | Positive | 1428793 - 1431243 | 92649.6 |
| hypothetical protein | DF947_06225 | Not Available | Positive | 1431248 - 1431910 | 24514.1 |
| hypothetical protein | DF947_06230 | Not Available | Positive | 1431907 - 1432563 | 24222.3 |
| hypothetical protein | DF947_06235 | Not Available | Positive | 1432560 - 1433222 | 25249.9 |
| hypothetical protein | DF947_06240 | Not Available | Positive | 1433228 - 1434007 | 29658.8 |
| plasmid transfer protein | DF947_06245 | Not Available | Positive | 1434021 - 1435160 | 41896.2 |
| conjugative transposon protein trak | DF947_06250 | Not Available | Positive | 1435164 - 1435784 | 23914.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

