Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | DF947_05905 | Not Available | Negative | 1349065 - 1349637 | 20354.9 |
| 5'(3')-deoxyribonucleotidase | DF947_05910 | Not Available | Positive | 1349803 - 1350303 | 19633.5 |
| hypothetical protein | DF947_05915 | Not Available | Negative | 1350640 - 1353693 | 114444.0 |
| hypothetical protein | DF947_05920 | Not Available | Positive | 1353961 - 1354287 | 11287.6 |
| 6-phosphofructokinase | DF947_05925 | Not Available | Negative | 1354341 - 1355324 | 35299.4 |
| hypothetical protein | DF947_05930 | Not Available | Negative | 1355317 - 1357011 | 61924.6 |
| sugar transporter | DF947_05935 | Not Available | Negative | 1357160 - 1357609 | 16773.5 |
| biotin--[acetyl-coa-carboxylase] ligase | DF947_05940 | Not Available | Negative | 1357606 - 1358391 | 29189.1 |
| ribosome silencing factor | DF947_05945 | Not Available | Positive | 1358436 - 1358810 | 14072.6 |
| peptidase m41 | DF947_05950 | Not Available | Positive | 1358838 - 1360937 | 76788.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

