Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrp family atp-binding protein | DF947_05855 | Not Available | Negative | 1339860 - 1340936 | 38380.4 |
| penicillin-binding protein | DF947_05860 | Not Available | Positive | 1341068 - 1343224 | 80601.6 |
| hypoxanthine phosphoribosyltransferase | DF947_05865 | Not Available | Positive | 1343337 - 1343879 | 20295.8 |
| phosphatidylserine decarboxylase family protein | DF947_05870 | Not Available | Positive | 1343935 - 1344594 | 25042.4 |
| mechanosensitive ion channel protein mscs | DF947_05875 | Not Available | Negative | 1344926 - 1346095 | 44090.0 |
| 50s ribosomal protein l19 | DF947_05880 | Not Available | Negative | 1346165 - 1346512 | 13066.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DF947_05885 | Not Available | Negative | 1346651 - 1347325 | 25060.0 |
| hypothetical protein | DF947_05890 | Not Available | Negative | 1347402 - 1347869 | 17775.2 |
| hypothetical protein | DF947_05895 | Not Available | Negative | 1347904 - 1348338 | 15983.2 |
| 16s rrna processing protein rimm | DF947_05900 | Not Available | Negative | 1348395 - 1348919 | 20189.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

