Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_05595 | Not Available | Negative | 1278441 - 1279109 | 25668.0 |
| hypothetical protein | DF947_05600 | Not Available | Negative | 1279153 - 1279593 | 15366.3 |
| hypothetical protein | DF947_05605 | Not Available | Negative | 1279669 - 1281108 | 52247.2 |
| tonb-dependent receptor | DF947_05610 | Not Available | Negative | 1281118 - 1284147 | 108717.0 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_05615 | Not Available | Negative | 1284566 - 1286086 | 55857.8 |
| susc/raga family tonb-linked outer membrane protein | DF947_05620 | Not Available | Negative | 1286113 - 1289286 | 115380.0 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_05625 | Not Available | Negative | 1289768 - 1291231 | 52750.7 |
| susc/raga family tonb-linked outer membrane protein | DF947_05630 | Not Available | Negative | 1291250 - 1294432 | 114281.0 |
| hypothetical protein | DF947_05635 | Not Available | Negative | 1294954 - 1296507 | 54988.9 |
| susc/raga family tonb-linked outer membrane protein | DF947_05640 | Not Available | Negative | 1296529 - 1299678 | 113060.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

