Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DF947_05295 | Not Available | Positive | 1218584 - 1220992 | 89910.1 |
| thiamine phosphate synthase | DF947_05300 | Not Available | Positive | 1221153 - 1221785 | 23274.7 |
| thiamine pyrophosphokinase | DF947_05305 | Not Available | Positive | 1221835 - 1222398 | 21075.2 |
| n-acetyltransferase | DF947_05310 | Not Available | Positive | 1222395 - 1222889 | 18861.8 |
| peptidase m28 | DF947_05315 | Not Available | Negative | 1222984 - 1224294 | 48168.8 |
| peptidase m61 | DF947_05320 | Not Available | Negative | 1224330 - 1226162 | 68555.2 |
| duf4407 domain-containing protein | DF947_05325 | Not Available | Negative | 1226284 - 1227408 | 42507.9 |
| hypothetical protein | DF947_05330 | Not Available | Positive | 1227572 - 1227973 | 15364.8 |
| hypothetical protein | DF947_05335 | Not Available | Positive | 1227988 - 1229817 | 67596.4 |
| hypothetical protein | DF947_05340 | Not Available | Positive | 1229895 - 1231337 | 54013.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

