Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e/g | DF947_05195 | Not Available | Negative | 1195330 - 1196880 | 58809.7 |
| hypothetical protein | DF947_05200 | Not Available | Negative | 1197163 - 1198041 | 31384.8 |
| integration host factor subunit beta | DF947_05205 | Not Available | Negative | 1198053 - 1198355 | 11104.6 |
| a/g-specific adenine glycosylase | DF947_05210 | Not Available | Positive | 1198524 - 1199582 | 40960.1 |
| single-stranded dna-binding protein | DF947_05215 | Not Available | Positive | 1199639 - 1200082 | 16515.5 |
| hypothetical protein | DF947_05220 | Not Available | Negative | 1200149 - 1200586 | 16233.9 |
| phage holin family protein | DF947_05225 | Not Available | Negative | 1200573 - 1200953 | 14211.3 |
| hypothetical protein | DF947_05230 | Not Available | Negative | 1201007 - 1201273 | 9402.05 |
| ai-2e family transporter | DF947_05235 | Not Available | Negative | 1201346 - 1202395 | 39354.6 |
| sigma-54-dependent fis family transcriptional regulator | DF947_05240 | Not Available | Negative | 1202446 - 1203876 | 53542.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

