Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_04995 | Not Available | Positive | 1153349 - 1154023 | 25887.1 |
| hypothetical protein | DF947_05000 | Not Available | Positive | 1154083 - 1154487 | 13677.9 |
| crp/fnr family transcriptional regulator | DF947_05005 | Not Available | Negative | 1154613 - 1155377 | 28694.0 |
| protein tyrosine phosphatase | DF947_05010 | Not Available | Negative | 1155418 - 1155852 | 16857.1 |
| hypothetical protein | DF947_05015 | Not Available | Negative | 1155857 - 1156294 | 15955.2 |
| s1/p1 nuclease | DF947_05020 | Not Available | Negative | 1156373 - 1157179 | 30568.9 |
| fumarate hydratase | DF947_05025 | Not Available | Negative | 1157181 - 1157666 | 18712.3 |
| class ii fumarate hydratase | DF947_05030 | Not Available | Negative | 1158039 - 1159436 | 49875.9 |
| sensor histidine kinase | DF947_05035 | Not Available | Positive | 1160010 - 1161602 | 60629.5 |
| dna-binding response regulator | DF947_05040 | Not Available | Positive | 1161604 - 1162347 | 28124.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

