Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4440 domain-containing protein | DF947_00005 | Not Available | + | 131 - 562 | 15896.0 |
| alpha/beta hydrolase | DF947_00010 | Not Available | + | 587 - 1642 | 38521.1 |
| carboxymuconolactone decarboxylase | DF947_00015 | Not Available | + | 1658 - 2374 | 26191.2 |
| 23s ribosomal rna | Not Available | Not Available | + | 2213 - 5091 | Not Available |
| alpha/beta hydrolase | DF947_00020 | Not Available | + | 2456 - 3517 | 38318.4 |
| cupin domain-containing protein | DF947_00025 | Not Available | + | 3529 - 3999 | 17246.0 |
| cyclic nucleotide-binding protein | DF947_00030 | Not Available | - | 4024 - 4626 | 23490.5 |
| nad-dependent dehydratase | DF947_00035 | Not Available | + | 4798 - 5865 | 40288.1 |
| 5s ribosomal rna | Not Available | Not Available | + | 5236 - 5347 | Not Available |
| oxidoreductase | DF947_00040 | Not Available | + | 6033 - 6782 | 25412.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.