Flavobacterium crocinum str. HYN0056

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium crocinum strain HYN0056 is characterized as a rod-shaped bacterium with the presence of flagella, which likely contributes to its motility. This strain has been assigned the accession number NZ_CP029255.1, indicating its genomic data is available for further study. Notably, it possesses a single replicon, suggesting a relatively simple genomic organization that may influence its adaptability and metabolic capabilities. The presence of flagella in Flavobacterium crocinum str. HYN0056 may facilitate its movement in various environments, potentially allowing it to colonize diverse ecological niches. This motility can enhance its ability to seek out nutrients or evade unfavorable conditions, which is significant for survival and proliferation in competitive environments. Understanding the traits of Flavobacterium crocinum str. HYN0056 can provide insights into its ecological role, particularly in aquatic ecosystems, where members of the Flavobacterium genus are known to participate in the degradation of organic matter. This strain may contribute to nutrient cycling and the overall health of its environment, highlighting the importance of studying microbial diversity and function within ecological systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium crocinum
StrainHYN0056

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium crocinum str. HYN0056
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium crocinum strain HYN0056 chromosome, complete

Gene Summary

Adenine Count

1935013 bp

Thymine Count

1944877 bp

Guanine Count

992504 bp

Cytosine Count

1005037 bp

Genome Length

5877431 bp

Protein-coding Genes

4872 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aconitate hydrataseHYN56_RS10560Not AvailablePositive2304530 - 230679481123.6
c40 family peptidaseHYN56_RS10565Not AvailablePositive2307094 - 230826042485.0
response regulatorHYN56_RS10570Not AvailableNegative2308264 - 230864715067.4
sensor histidine kinaseHYN56_RS10575Not AvailableNegative2308637 - 231006154253.9
methyltransferase domain-containing proteinHYN56_RS10580Not AvailableNegative2310441 - 231119929127.8
duf5958 family proteinHYN56_RS10585Not AvailableNegative2311297 - 231169515556.7
apc family permeaseHYN56_RS10590Not AvailablePositive2311965 - 231337451186.5
hypothetical proteinHYN56_RS10595Not AvailableNegative2313628 - 231437426860.2
mfs transporterHYN56_RS10600Not AvailableNegative2314541 - 231494215116.0
duf1810 domain-containing proteinHYN56_RS10605Not AvailableNegative2315079 - 231554017133.7

Displaying genes 2091 – 2100 of 4959 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.