Flavobacterium pallidum str. HYN0049

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium pallidum str. HYN0049 is a rod-shaped bacterium characterized by the presence of flagella, enabling motility. This species falls under the genus Flavobacterium, which is known for its ecological role in the degradation of organic matter in various environments. The genome of Flavobacterium pallidum str. HYN0049 contains a single replicon, which can be significant for understanding its genetic stability and replication processes. The accession number for this strain is NZ_CP029187.1, which provides a reference for researchers looking to access its genomic information. The presence of flagella suggests that Flavobacterium pallidum str. HYN0049 may exhibit enhanced movement capabilities in aquatic environments, potentially aiding in colonization and nutrient acquisition. This motility could play a crucial role in its ecological interactions, particularly in the degradation of organic substrates in freshwater systems. Overall, the combination of its rod shape and flagellar motility indicates that Flavobacterium pallidum str. HYN0049 is well-adapted to its ecological niche, where it likely contributes to the cycling of nutrients and the maintenance of ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium pallidum
StrainHYN0049

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium pallidum str. HYN0049
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium pallidum str. HYN0049


Gene Summary

Adenine Count

997055 bp

Thymine Count

1004248 bp

Guanine Count

778039 bp

Cytosine Count

773414 bp

Genome Length

3552756 bp

Protein-coding Genes

2923 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaHYN49_RS00005Not AvailablePositive1 - 142854513.7
low molecular weight protein-tyrosine-phosphataseHYN49_RS00010Not AvailablePositive1428 - 189517442.9
sam-dependent methyltransferaseHYN49_RS00015Not AvailablePositive1917 - 266327480.6
helix-turn-helix transcriptional regulatorHYN49_RS00020Not AvailableNegative2687 - 28937684.36
hypothetical proteinHYN49_RS00025Not AvailableNegative2883 - 335918715.2
peptidoglycan-binding protein lysmHYN49_RS00030Not AvailableNegative3540 - 417823692.3
duf2279 domain-containing proteinHYN49_RS00035Not AvailableNegative4277 - 522135202.9
endolytic transglycosylase mltgHYN49_RS00040Not AvailableNegative5191 - 623139850.2
gnat family n-acetyltransferaseHYN49_RS00045Not AvailableNegative6243 - 677620620.4
t9ss type a sorting domain-containing proteinHYN49_RS00050Not AvailableNegative6781 - 756228640.9

Displaying genes 1 – 10 of 48 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.