Photorhabdus luminescens subsp. mexicana

Rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus luminescens subsp. mexicana is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of true flagella, which facilitate its motility. This subspecies is classified as a facultative anaerobe, meaning it can survive in both aerobic and anaerobic environments, allowing it to thrive in diverse ecological niches. The organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability. The genetic information for this subspecies is documented under the accession number PUJX00000000.1, which serves as a reference for researchers studying its specific genetic and functional traits. Photorhabdus luminescens subsp. mexicana is known for its symbiotic relationship with nematodes, particularly in the context of biocontrol. The bacterium is often associated with the nematode Heterorhabditis, which aids in the biological control of various insect pests. When the nematodes infect a host, they introduce P. luminescens, which produces toxins that kill the insect, creating a nutrient-rich environment for both the nematode and the bacteria. The ecological insight gleaned from the study of P. luminescens subsp. mexicana underscores the importance of microbial interactions within ecosystems, particularly in pest management strategies. This bacterium not only plays a critical role in the life cycle of its nematode partner but also contributes to the regulation of insect populations, highlighting its potential utility in sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus luminescens
Strainsubsp. mexicana

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus luminescens subsp. mexicana
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus luminescens subsp. mexicana strain MEX47-22

Gene Summary

Adenine Count

1683156 bp

Thymine Count

1666258 bp

Guanine Count

1232000 bp

Cytosine Count

1246342 bp

Genome Length

5827786 bp

Protein-coding Genes

4449 genes

Non-Coding Genes

467 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endolytic peptidoglycan transglycosylase rlpaC5468_16005Not AvailablePositive3745008 - 374601836871.6
serine-type d-ala-d-ala carboxypeptidaseC5468_16010Not AvailablePositive3746180 - 374739144314.0
hypothetical proteinC5468_16015Not AvailablePositive3747548 - 37478119800.8
lipoyl(octanoyl) transferase lipbC5468_16020Not AvailablePositive3747943 - 374858423851.3
lipoyl synthaseC5468_16025Not AvailablePositive3748697 - 374966236314.1
fluoride efflux transporter crcbC5468_16030Not AvailablePositive3749675 - 375004913321.9
cold-shock proteinC5468_16035Not AvailableNegative3750126 - 37503839382.39
cysteine methyltransferaseC5468_16040Not AvailableNegative3750555 - 375101617348.9
nrdh-redoxinC5468_16045Not AvailablePositive3751348 - 37515788486.18
class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdiC5468_16050Not AvailablePositive3751586 - 375200815512.7

Displaying genes 3321 – 3330 of 4916 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.