Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1C5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
510507 bp
Thymine Count
509409 bp
Guanine Count
1310839 bp
Cytosine Count
1319937 bp
Genome Length
3650703 bp
Protein-coding Genes
3379 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | C5C57_02725 | Not Available | Negative | 589869 - 590852 | 34106.1 |
| laci family transcriptional regulator | C5C57_02730 | Not Available | Negative | 590893 - 591792 | 31000.9 |
| hypothetical protein | C5C57_02735 | Not Available | Positive | 592202 - 592843 | 21829.0 |
| 1,4-beta-xylanase | C5C57_02740 | Not Available | Positive | 592840 - 595740 | 101975.0 |
| carbohydrate-binding protein | C5C57_02745 | Not Available | Positive | 595878 - 598259 | 82401.5 |
| lysr family transcriptional regulator | C5C57_02750 | Not Available | Negative | 598404 - 599357 | 33511.5 |
| succinate dehydrogenase | C5C57_02755 | Not Available | Positive | 599428 - 601179 | 62780.0 |
| mfs transporter | C5C57_02760 | Not Available | Positive | 601346 - 602941 | 57060.4 |
| hypothetical protein | C5C57_02765 | Not Available | Negative | 603243 - 604271 | 37391.5 |
| hypothetical protein | C5C57_02770 | Not Available | Positive | 605050 - 607995 | 100272.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
