Rathayibacter sp. AY1C5

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter sp. AY1C5 is a Gram-positive bacterium characterized by its rod shape. It possesses a single replicon, which indicates a streamlined genomic structure that may facilitate efficient replication and stability within its environment. The organism is cataloged under the accession number PSWD00000000.1, providing a reference point for further studies and comparisons within the Rathayibacter genus. The Gram-positive nature of Rathayibacter sp. AY1C5 suggests that it has a thick peptidoglycan layer in its cell wall, a feature that is often associated with a variety of ecological roles, including resistance to certain environmental stressors. Gram-positive bacteria are generally known for their ability to survive in diverse habitats, which may confer ecological advantages in various niches. Understanding the specific traits of Rathayibacter sp. AY1C5, including its morphology and genetic structure, is essential for elucidating its potential ecological functions and interactions within microbial communities. Its rod shape may influence its motility and ability to colonize different substrates, while the presence of a single replicon could suggest a robust mechanism for maintaining genomic integrity under varying conditions. This bacterium's characteristics may play a role in its interactions with other microorganisms, host organisms, or the environment, highlighting its significance in microbial ecology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter sp. AY1C5
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter sp. AY1C5 AY1C5_93, whole genome shotgun sequence.

Gene Summary

Adenine Count

510507 bp

Thymine Count

509409 bp

Guanine Count

1310839 bp

Cytosine Count

1319937 bp

Genome Length

3650703 bp

Protein-coding Genes

3379 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutaredoxin-like protein nrdhC5C57_13830Not AvailablePositive2891455 - 28916737941.41
class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdiC5C57_13835Not AvailablePositive2891814 - 289223015101.0
ribonucleotide-diphosphate reductase subunit alphaC5C57_13840Not AvailablePositive2892257 - 289436279403.8
class 1b ribonucleoside-diphosphate reductase subunit betaC5C57_13845Not AvailablePositive2894418 - 289539837499.0
gnat family n-acetyltransferaseC5C57_13850Not AvailableNegative2895608 - 289618020668.7
aldo/keto reductaseC5C57_13855Not AvailablePositive2896478 - 289735031983.0
aaa family atpaseC5C57_13860Not AvailablePositive2897563 - 290009491176.9
hypothetical proteinC5C57_13865Not AvailablePositive2900274 - 29005228704.86
penicillin-binding proteinC5C57_13870Not AvailableNegative2900623 - 290311285983.8
hypothetical proteinC5C57_13875Not AvailablePositive2903353 - 290384116730.8

Displaying genes 2731 – 2740 of 3453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.