Rathayibacter sp. AY1C5

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter sp. AY1C5 is a Gram-positive bacterium characterized by its rod shape. It possesses a single replicon, which indicates a streamlined genomic structure that may facilitate efficient replication and stability within its environment. The organism is cataloged under the accession number PSWD00000000.1, providing a reference point for further studies and comparisons within the Rathayibacter genus. The Gram-positive nature of Rathayibacter sp. AY1C5 suggests that it has a thick peptidoglycan layer in its cell wall, a feature that is often associated with a variety of ecological roles, including resistance to certain environmental stressors. Gram-positive bacteria are generally known for their ability to survive in diverse habitats, which may confer ecological advantages in various niches. Understanding the specific traits of Rathayibacter sp. AY1C5, including its morphology and genetic structure, is essential for elucidating its potential ecological functions and interactions within microbial communities. Its rod shape may influence its motility and ability to colonize different substrates, while the presence of a single replicon could suggest a robust mechanism for maintaining genomic integrity under varying conditions. This bacterium's characteristics may play a role in its interactions with other microorganisms, host organisms, or the environment, highlighting its significance in microbial ecology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter sp. AY1C5
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter sp. AY1C5 AY1C5_93, whole genome shotgun sequence.

Gene Summary

Adenine Count

510507 bp

Thymine Count

509409 bp

Guanine Count

1310839 bp

Cytosine Count

1319937 bp

Genome Length

3650703 bp

Protein-coding Genes

3379 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
orotidine-5'-phosphate decarboxylaseC5C57_11045Not AvailablePositive2304214 - 230509529475.9
guanylate kinaseC5C57_11050Not AvailablePositive2305085 - 230606535430.3
dna-directed rna polymerase subunit omegaC5C57_11055Not AvailablePositive2306192 - 23064469265.0
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcC5C57_11060Not AvailablePositive2306457 - 230768341789.4
methionine adenosyltransferaseC5C57_11065Not AvailablePositive2307798 - 230900342809.3
preprotein translocase subunit secaC5C57_11070Not AvailablePositive2309018 - 231098269245.0
methyltransferaseC5C57_11080Not AvailablePositive2311626 - 231329958476.6
ribulose-phosphate 3-epimeraseC5C57_11085Not AvailablePositive2313372 - 231404024162.7
phosphoribosyl-atp diphosphataseC5C57_11090Not AvailablePositive2314077 - 23143409682.51
atp phosphoribosyltransferaseC5C57_11095Not AvailablePositive2314451 - 231531430611.8

Displaying genes 2181 – 2190 of 3453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.