Rathayibacter sp. AY1C5

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter sp. AY1C5 is a Gram-positive bacterium characterized by its rod shape. It possesses a single replicon, which indicates a streamlined genomic structure that may facilitate efficient replication and stability within its environment. The organism is cataloged under the accession number PSWD00000000.1, providing a reference point for further studies and comparisons within the Rathayibacter genus. The Gram-positive nature of Rathayibacter sp. AY1C5 suggests that it has a thick peptidoglycan layer in its cell wall, a feature that is often associated with a variety of ecological roles, including resistance to certain environmental stressors. Gram-positive bacteria are generally known for their ability to survive in diverse habitats, which may confer ecological advantages in various niches. Understanding the specific traits of Rathayibacter sp. AY1C5, including its morphology and genetic structure, is essential for elucidating its potential ecological functions and interactions within microbial communities. Its rod shape may influence its motility and ability to colonize different substrates, while the presence of a single replicon could suggest a robust mechanism for maintaining genomic integrity under varying conditions. This bacterium's characteristics may play a role in its interactions with other microorganisms, host organisms, or the environment, highlighting its significance in microbial ecology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter sp. AY1C5
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter sp. AY1C5 AY1C5_93, whole genome shotgun sequence.

Gene Summary

Adenine Count

510507 bp

Thymine Count

509409 bp

Guanine Count

1310839 bp

Cytosine Count

1319937 bp

Genome Length

3650703 bp

Protein-coding Genes

3379 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseC5C57_09015Not AvailableNegative1883391 - 188420327790.7
glycosyl transferase family 2C5C57_09020Not AvailablePositive1884359 - 188513528564.9
mfs transporterC5C57_09025Not AvailableNegative1885165 - 188656547706.0
hypothetical proteinC5C57_09030Not AvailableNegative1886849 - 188713910520.3
hypothetical proteinC5C57_09035Not AvailablePositive1887205 - 188755212772.3
bifunctional 3'-5' exonuclease/dna polymeraseC5C57_09040Not AvailablePositive1887627 - 188922856542.5
hypothetical proteinC5C57_09045Not AvailableNegative1889238 - 189048843276.1
padr family transcriptional regulatorC5C57_09050Not AvailableNegative1890613 - 189134125940.6
duf3145 domain-containing proteinC5C57_09055Not AvailablePositive1891420 - 189192318348.7
beta-ketoacyl-[acyl-carrier-protein] synthase iiC5C57_09060Not AvailableNegative1892738 - 189397342904.8

Displaying genes 1781 – 1790 of 3453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.