Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1C5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
510507 bp
Thymine Count
509409 bp
Guanine Count
1310839 bp
Cytosine Count
1319937 bp
Genome Length
3650703 bp
Protein-coding Genes
3379 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prenyltransferase | C5C57_07825 | Not Available | Negative | 1646873 - 1648096 | 43872.4 |
| lycopene cyclase domain-containing protein | C5C57_07830 | Not Available | Negative | 1648041 - 1648370 | 12239.4 |
| phytoene desaturase | C5C57_07835 | Not Available | Negative | 1648373 - 1650898 | 90470.5 |
| geranylgeranyl pyrophosphate synthase | C5C57_07840 | Not Available | Negative | 1650969 - 1652006 | 36812.6 |
| isopentenyl-diphosphate delta-isomerase | C5C57_07845 | Not Available | Positive | 1652114 - 1652665 | 20036.7 |
| dctp deaminase | C5C57_07850 | Not Available | Negative | 1652694 - 1653278 | 21457.4 |
| Trna-gly | Not Available | Not Available | Positive | 1653366 - 1653436 | Not Available |
| duf2000 domain-containing protein | C5C57_07860 | Not Available | Negative | 1653577 - 1654056 | 16244.3 |
| asnc family transcriptional regulator | C5C57_07865 | Not Available | Positive | 1654130 - 1654639 | 18809.4 |
| dienelactone hydrolase | C5C57_07870 | Not Available | Positive | 1654727 - 1655377 | 22663.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
