Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1C5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
510507 bp
Thymine Count
509409 bp
Guanine Count
1310839 bp
Cytosine Count
1319937 bp
Genome Length
3650703 bp
Protein-coding Genes
3379 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | C5C57_06820 | Not Available | Negative | 1446756 - 1447316 | 20025.1 |
| transcription antitermination factor nusb | C5C57_06825 | Not Available | Negative | 1447473 - 1447892 | 15131.8 |
| elongation factor p | C5C57_06830 | Not Available | Negative | 1447905 - 1448465 | 20330.0 |
| 3-dehydroquinate synthase | C5C57_06835 | Not Available | Negative | 1448645 - 1449724 | 38528.4 |
| shikimate kinase | C5C57_06840 | Not Available | Negative | 1449721 - 1450305 | 20668.6 |
| chorismate synthase | C5C57_06845 | Not Available | Negative | 1450331 - 1451548 | 42214.3 |
| shikimate dehydrogenase | C5C57_06850 | Not Available | Negative | 1451571 - 1452542 | 33386.1 |
| endolytic transglycosylase mltg | C5C57_06855 | Not Available | Negative | 1452416 - 1453777 | 48675.6 |
| holliday junction resolvase ruvx | C5C57_06860 | Not Available | Negative | 1453614 - 1454198 | 20120.8 |
| alanine--trna ligase | C5C57_06865 | Not Available | Negative | 1454199 - 1456856 | 94955.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
