Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1C5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
510507 bp
Thymine Count
509409 bp
Guanine Count
1310839 bp
Cytosine Count
1319937 bp
Genome Length
3650703 bp
Protein-coding Genes
3379 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | C5C57_06615 | Not Available | Positive | 1407798 - 1408106 | 11013.3 |
| duf3046 domain-containing protein | C5C57_06620 | Not Available | Positive | 1408228 - 1408452 | 8401.96 |
| recombinase reca | C5C57_06625 | Not Available | Positive | 1408733 - 1409800 | 38103.8 |
| hypothetical protein | C5C57_06630 | Not Available | Positive | 1409804 - 1410622 | 29134.1 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | C5C57_06635 | Not Available | Positive | 1410668 - 1412236 | 56726.1 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | C5C57_06640 | Not Available | Positive | 1412223 - 1413194 | 34908.6 |
| diaminopimelate epimerase | C5C57_06645 | Not Available | Positive | 1413205 - 1414086 | 30745.3 |
| 16s rrna methyltransferase | C5C57_06650 | Not Available | Negative | 1414095 - 1414706 | 22216.5 |
| gtpase hflx | C5C57_06655 | Not Available | Positive | 1414750 - 1416288 | 55088.2 |
| repressor lexa | C5C57_06660 | Not Available | Negative | 1416539 - 1417243 | 25084.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
