Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1C5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
510507 bp
Thymine Count
509409 bp
Guanine Count
1310839 bp
Cytosine Count
1319937 bp
Genome Length
3650703 bp
Protein-coding Genes
3379 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor nusa | C5C57_00380 | Not Available | Negative | 83194 - 84195 | 36011.0 |
| proline--trna ligase | C5C57_00385 | Not Available | Negative | 84386 - 86152 | 63837.7 |
| hypothetical protein | C5C57_00390 | Not Available | Negative | 86206 - 86688 | 16352.4 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | C5C57_00395 | Not Available | Negative | 86708 - 87877 | 40919.4 |
| peptidase | C5C57_00400 | Not Available | Negative | 88256 - 89632 | 47788.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C5C57_00405 | Not Available | Negative | 89784 - 90866 | 38102.1 |
| peptidylprolyl isomerase | C5C57_00410 | Not Available | Negative | 90904 - 91986 | 36411.7 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C5C57_00415 | Not Available | Positive | 91993 - 93327 | 47321.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | C5C57_00420 | Not Available | Positive | 93376 - 94131 | 26948.3 |
| peroxiredoxin | C5C57_00425 | Not Available | Negative | 94135 - 94602 | 16705.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
