Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1B1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
482528 bp
Thymine Count
485394 bp
Guanine Count
1263763 bp
Cytosine Count
1259964 bp
Genome Length
3491966 bp
Protein-coding Genes
3216 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deferrochelatase/peroxidase efeb | C5D34_00390 | Not Available | Negative | 85866 - 87158 | 44987.4 |
| hypothetical protein | C5D34_00395 | Not Available | Negative | 87185 - 88435 | 43305.7 |
| high-affinity fe2+/pb2+ permease | C5D34_00400 | Not Available | Negative | 88481 - 89347 | 29867.0 |
| mycothiol biosynthesis protein | C5D34_00405 | Not Available | Positive | 89562 - 90734 | 39901.4 |
| ferredoxin | C5D34_00410 | Not Available | Positive | 90764 - 91084 | 11670.6 |
| succinyldiaminopimelate transaminase | C5D34_00415 | Not Available | Positive | 91095 - 92204 | 39117.5 |
| citrate (si)-synthase | C5D34_00420 | Not Available | Positive | 92454 - 93800 | 49792.2 |
| hypothetical protein | C5D34_00425 | Not Available | Positive | 94143 - 94463 | 12409.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C5D34_00430 | Not Available | Negative | 94861 - 95841 | 33859.3 |
| succinyl-diaminopimelate desuccinylase | C5D34_00435 | Not Available | Positive | 95887 - 96984 | 38936.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
