Rathayibacter sp. AY1B1

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter sp. AY1B1 is a Gram-positive bacterium characterized by its rod shape. This microorganism is notable for having a single replicon, which is a critical feature for understanding its genetic and reproductive behavior. The accession number for Rathayibacter sp. AY1B1 is PSWO00000000.1, which serves as a reference for its genomic data. As a member of the genus Rathayibacter, this species may have implications for agricultural and ecological studies, particularly in relation to plant health and disease. Rathayibacter species are known to be associated with various plant hosts and can influence plant-microbe interactions. The rod shape of Rathayibacter sp. AY1B1 suggests its potential role in specific ecological niches where such morphology may confer advantages in nutrient acquisition or survival. In summary, Rathayibacter sp. AY1B1 is a Gram-positive, rod-shaped bacterium with a singular replicon. Its classification and genetic makeup indicate a potential role in agricultural ecosystems, highlighting the importance of understanding the interactions between plant-associated bacteria and their hosts. Further research could elucidate its specific contributions to plant health and microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter sp. AY1B1
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter sp. AY1B1 AY1B1_449, whole genome shotgun sequence.

Gene Summary

Adenine Count

482528 bp

Thymine Count

485394 bp

Guanine Count

1263763 bp

Cytosine Count

1259964 bp

Genome Length

3491966 bp

Protein-coding Genes

3216 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein sepfC5D34_02295Not AvailableNegative514371 - 51488318374.8
yggs family pyridoxal phosphate-dependent enzymeC5D34_02300Not AvailableNegative514933 - 51561024265.7
cell division protein ftszC5D34_02305Not AvailableNegative515613 - 51677339117.3
cell division protein ftsqC5D34_02310Not AvailableNegative516931 - 51789333403.0
udp-n-acetylmuramate--l-alanine ligaseC5D34_02315Not AvailableNegative517928 - 51934049539.2
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseC5D34_02320Not AvailableNegative519451 - 52053037704.5
putative lipid ii flippase ftswC5D34_02325Not AvailableNegative520527 - 52178644250.2
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseC5D34_02330Not AvailableNegative521740 - 52327553767.8
phospho-n-acetylmuramoyl-pentapeptide- transferaseC5D34_02335Not AvailableNegative523272 - 52436639253.8
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseC5D34_02340Not AvailableNegative524363 - 52578749529.2

Displaying genes 461 – 470 of 3265 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.