Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1B1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
482528 bp
Thymine Count
485394 bp
Guanine Count
1263763 bp
Cytosine Count
1259964 bp
Genome Length
3491966 bp
Protein-coding Genes
3216 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | C5D34_14185 | Not Available | Negative | 3009609 - 3010826 | 42152.3 |
| shikimate dehydrogenase | C5D34_14190 | Not Available | Negative | 3010849 - 3011733 | 29794.6 |
| endolytic transglycosylase mltg | C5D34_14195 | Not Available | Negative | 3011694 - 3013055 | 48778.9 |
| holliday junction resolvase ruvx | C5D34_14200 | Not Available | Negative | 3012892 - 3013476 | 20230.9 |
| alanine--trna ligase | C5D34_14205 | Not Available | Negative | 3013477 - 3016134 | 95001.2 |
| hypothetical protein | C5D34_14210 | Not Available | Negative | 3016187 - 3016378 | 6692.09 |
| duf948 domain-containing protein | C5D34_14215 | Not Available | Negative | 3016454 - 3016870 | 13960.0 |
| 30s ribosomal protein s4 | C5D34_14220 | Not Available | Negative | 3017503 - 3018132 | 23744.8 |
| aaa family atpase | C5D34_14225 | Not Available | Negative | 3018369 - 3019799 | 51094.6 |
| peptidylprolyl isomerase | C5D34_14230 | Not Available | Positive | 3019961 - 3020749 | 26687.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
