Rathayibacter sp. AY1B1

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter sp. AY1B1 is a Gram-positive bacterium characterized by its rod shape. This microorganism is notable for having a single replicon, which is a critical feature for understanding its genetic and reproductive behavior. The accession number for Rathayibacter sp. AY1B1 is PSWO00000000.1, which serves as a reference for its genomic data. As a member of the genus Rathayibacter, this species may have implications for agricultural and ecological studies, particularly in relation to plant health and disease. Rathayibacter species are known to be associated with various plant hosts and can influence plant-microbe interactions. The rod shape of Rathayibacter sp. AY1B1 suggests its potential role in specific ecological niches where such morphology may confer advantages in nutrient acquisition or survival. In summary, Rathayibacter sp. AY1B1 is a Gram-positive, rod-shaped bacterium with a singular replicon. Its classification and genetic makeup indicate a potential role in agricultural ecosystems, highlighting the importance of understanding the interactions between plant-associated bacteria and their hosts. Further research could elucidate its specific contributions to plant health and microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter sp. AY1B1
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter sp. AY1B1 AY1B1_449, whole genome shotgun sequence.

Gene Summary

Adenine Count

482528 bp

Thymine Count

485394 bp

Guanine Count

1263763 bp

Cytosine Count

1259964 bp

Genome Length

3491966 bp

Protein-coding Genes

3216 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseC5D34_13880Not AvailableNegative2947813 - 294881134661.5
deoxyribonucleaseC5D34_13885Not AvailableNegative2948808 - 294973133664.4
short-chain dehydrogenaseC5D34_13890Not AvailablePositive2949882 - 295067026437.5
arac family transcriptional regulatorC5D34_13895Not AvailableNegative2950717 - 295160731947.6
methionine--trna ligaseC5D34_13900Not AvailableNegative2951753 - 295333058826.1
16s rrna (cytidine(1402)-2'-o)-methyltransferaseC5D34_13905Not AvailableNegative2953423 - 295424429341.2
phospholipid carrier-dependent glycosyltransferaseC5D34_13910Not AvailablePositive2954453 - 295600957308.4
putative sulfate exporter family transporterC5D34_13915Not AvailablePositive2956000 - 295698933053.9
o-acetylhomoserine aminocarboxypropyltransferaseC5D34_13920Not AvailablePositive2957060 - 295842448380.9
coa-binding proteinC5D34_13925Not AvailablePositive2958427 - 295900521058.2

Displaying genes 2731 – 2740 of 3265 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.