Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1B1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
482528 bp
Thymine Count
485394 bp
Guanine Count
1263763 bp
Cytosine Count
1259964 bp
Genome Length
3491966 bp
Protein-coding Genes
3216 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit cofg | C5D34_11395 | Not Available | Negative | 2411377 - 2413767 | 86111.7 |
| glucose-6-phosphate dehydrogenase (coenzyme-f420) | C5D34_11400 | Not Available | Negative | 2413812 - 2414834 | 37346.0 |
| hypothetical protein | C5D34_11405 | Not Available | Negative | 2414964 - 2415380 | 14497.0 |
| carbohydrate kinase | C5D34_11410 | Not Available | Negative | 2415469 - 2416380 | 31223.1 |
| hydrolase | C5D34_11415 | Not Available | Negative | 2416463 - 2417008 | 19413.0 |
| allantoin permease | C5D34_11420 | Not Available | Negative | 2417005 - 2418453 | 49817.6 |
| polyketide cyclase | C5D34_11425 | Not Available | Negative | 2418504 - 2418914 | 14828.4 |
| peptidase m20 | C5D34_11430 | Not Available | Negative | 2418940 - 2420133 | 42204.3 |
| rna polymerase subunit sigma | C5D34_11435 | Not Available | Positive | 2420221 - 2420730 | 19010.7 |
| anti-sigma factor | C5D34_11440 | Not Available | Positive | 2420727 - 2421452 | 25182.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
