Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1B1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
482528 bp
Thymine Count
485394 bp
Guanine Count
1263763 bp
Cytosine Count
1259964 bp
Genome Length
3491966 bp
Protein-coding Genes
3216 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | C5D34_10105 | Not Available | Positive | 2145166 - 2145768 | 22367.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | C5D34_10110 | Not Available | Positive | 2145790 - 2146623 | 28686.0 |
| hypothetical protein | C5D34_10115 | Not Available | Positive | 2146620 - 2147066 | 16147.8 |
| tigr01777 family protein | C5D34_10120 | Not Available | Negative | 2147112 - 2148140 | 36834.6 |
| duf4395 domain-containing protein | C5D34_10125 | Not Available | Negative | 2148196 - 2148723 | 17763.8 |
| thioredoxin | C5D34_10130 | Not Available | Negative | 2148723 - 2149157 | 15338.8 |
| thymidylate synthase (fad) | C5D34_10135 | Not Available | Positive | 2149249 - 2150019 | 29057.3 |
| hypothetical protein | C5D34_10140 | Not Available | Positive | 2150600 - 2151454 | 31303.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C5D34_10145 | Not Available | Positive | 2151813 - 2152790 | 34252.1 |
| rnase j family beta-casp ribonuclease | C5D34_10150 | Not Available | Positive | 2152838 - 2154514 | 60197.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
