Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1B1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
482528 bp
Thymine Count
485394 bp
Guanine Count
1263763 bp
Cytosine Count
1259964 bp
Genome Length
3491966 bp
Protein-coding Genes
3216 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C5D34_10005 | Not Available | Negative | 2123153 - 2123605 | 14950.1 |
| penicillin-binding protein | C5D34_10010 | Not Available | Positive | 2123877 - 2126243 | 82561.6 |
| metallophosphatase | C5D34_10015 | Not Available | Positive | 2126330 - 2127271 | 33196.6 |
| Trna-pro | Not Available | Not Available | Positive | 2127349 - 2127425 | Not Available |
| vanz family protein | C5D34_10025 | Not Available | Positive | 2127703 - 2128272 | 20735.6 |
| udp-glucose 6-dehydrogenase | C5D34_10030 | Not Available | Negative | 2128291 - 2129595 | 45346.8 |
| hypothetical protein | C5D34_10035 | Not Available | Negative | 2129694 - 2130368 | 23841.5 |
| lipopolysaccharide biosynthesis protein | C5D34_10040 | Not Available | Negative | 2130379 - 2131839 | 51099.5 |
| hypothetical protein | C5D34_10045 | Not Available | Negative | 2131941 - 2133056 | 38321.6 |
| polyprenyl glycosylphosphotransferase | C5D34_10050 | Not Available | Negative | 2133122 - 2134606 | 54950.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
