Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1B1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
482528 bp
Thymine Count
485394 bp
Guanine Count
1263763 bp
Cytosine Count
1259964 bp
Genome Length
3491966 bp
Protein-coding Genes
3216 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate--2-oxoglutarate transaminase | C5D34_00790 | Not Available | Negative | 172388 - 173722 | 47304.5 |
| peptidylprolyl isomerase | C5D34_00795 | Not Available | Positive | 173845 - 174810 | 32035.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C5D34_00800 | Not Available | Positive | 174848 - 175930 | 38100.1 |
| peptidase | C5D34_00805 | Not Available | Positive | 176082 - 177458 | 47776.4 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | C5D34_00810 | Not Available | Positive | 178092 - 179261 | 40919.4 |
| hypothetical protein | C5D34_00815 | Not Available | Positive | 179283 - 179765 | 16308.4 |
| proline--trna ligase | C5D34_00820 | Not Available | Positive | 179819 - 181585 | 63781.6 |
| transcription elongation factor nusa | C5D34_00825 | Not Available | Positive | 181776 - 182777 | 36011.0 |
| duf448 domain-containing protein | C5D34_00830 | Not Available | Positive | 182829 - 183152 | 11762.0 |
| translation initiation factor if-2 | C5D34_00835 | Not Available | Positive | 183251 - 186136 | 99166.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
