Rathayibacter sp. AY1B1

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter sp. AY1B1 is a Gram-positive bacterium characterized by its rod shape. This microorganism is notable for having a single replicon, which is a critical feature for understanding its genetic and reproductive behavior. The accession number for Rathayibacter sp. AY1B1 is PSWO00000000.1, which serves as a reference for its genomic data. As a member of the genus Rathayibacter, this species may have implications for agricultural and ecological studies, particularly in relation to plant health and disease. Rathayibacter species are known to be associated with various plant hosts and can influence plant-microbe interactions. The rod shape of Rathayibacter sp. AY1B1 suggests its potential role in specific ecological niches where such morphology may confer advantages in nutrient acquisition or survival. In summary, Rathayibacter sp. AY1B1 is a Gram-positive, rod-shaped bacterium with a singular replicon. Its classification and genetic makeup indicate a potential role in agricultural ecosystems, highlighting the importance of understanding the interactions between plant-associated bacteria and their hosts. Further research could elucidate its specific contributions to plant health and microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter sp. AY1B1
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter sp. AY1B1 AY1B1_449, whole genome shotgun sequence.

Gene Summary

Adenine Count

482528 bp

Thymine Count

485394 bp

Guanine Count

1263763 bp

Cytosine Count

1259964 bp

Genome Length

3491966 bp

Protein-coding Genes

3216 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-aminobutyrate--2-oxoglutarate transaminaseC5D34_00790Not AvailableNegative172388 - 17372247304.5
peptidylprolyl isomeraseC5D34_00795Not AvailablePositive173845 - 17481032035.3
1-deoxy-d-xylulose-5-phosphate reductoisomeraseC5D34_00800Not AvailablePositive174848 - 17593038100.1
peptidaseC5D34_00805Not AvailablePositive176082 - 17745847776.4
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseC5D34_00810Not AvailablePositive178092 - 17926140919.4
hypothetical proteinC5D34_00815Not AvailablePositive179283 - 17976516308.4
proline--trna ligaseC5D34_00820Not AvailablePositive179819 - 18158563781.6
transcription elongation factor nusaC5D34_00825Not AvailablePositive181776 - 18277736011.0
duf448 domain-containing proteinC5D34_00830Not AvailablePositive182829 - 18315211762.0
translation initiation factor if-2C5D34_00835Not AvailablePositive183251 - 18613699166.5

Displaying genes 161 – 170 of 3265 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.