Rathayibacter sp. AY1B1

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter sp. AY1B1 is a Gram-positive bacterium characterized by its rod shape. This microorganism is notable for having a single replicon, which is a critical feature for understanding its genetic and reproductive behavior. The accession number for Rathayibacter sp. AY1B1 is PSWO00000000.1, which serves as a reference for its genomic data. As a member of the genus Rathayibacter, this species may have implications for agricultural and ecological studies, particularly in relation to plant health and disease. Rathayibacter species are known to be associated with various plant hosts and can influence plant-microbe interactions. The rod shape of Rathayibacter sp. AY1B1 suggests its potential role in specific ecological niches where such morphology may confer advantages in nutrient acquisition or survival. In summary, Rathayibacter sp. AY1B1 is a Gram-positive, rod-shaped bacterium with a singular replicon. Its classification and genetic makeup indicate a potential role in agricultural ecosystems, highlighting the importance of understanding the interactions between plant-associated bacteria and their hosts. Further research could elucidate its specific contributions to plant health and microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter sp. AY1B1
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter sp. AY1B1 AY1B1_449, whole genome shotgun sequence.

Gene Summary

Adenine Count

482528 bp

Thymine Count

485394 bp

Guanine Count

1263763 bp

Cytosine Count

1259964 bp

Genome Length

3491966 bp

Protein-coding Genes

3216 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease iiiC5D34_06110Not AvailablePositive1310400 - 131114025702.6
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseC5D34_06115Not AvailablePositive1311143 - 131205732832.5
duf1275 domain-containing proteinC5D34_06120Not AvailableNegative1312077 - 131283825739.2
acetamidaseC5D34_06125Not AvailablePositive1312902 - 131399337875.2
duf3225 domain-containing proteinC5D34_06130Not AvailablePositive1313986 - 131550050816.8
hypothetical proteinC5D34_06135Not AvailableNegative1315707 - 13159528738.01
aminotransferaseC5D34_06140Not AvailablePositive1316168 - 131735541981.5
allantoate amidohydrolaseC5D34_06145Not AvailablePositive1317352 - 131865645655.7
murr/rpir family transcriptional regulatorC5D34_06150Not AvailablePositive1318683 - 131950728975.5
iron-sulfur cluster assembly scaffold proteinC5D34_06155Not AvailablePositive1319504 - 131991413983.6

Displaying genes 1211 – 1220 of 3265 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.