Citrobacter freundii complex sp. CFNIH9

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii complex sp. CFNIH9 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This organism is part of the Citrobacter genus, known for its ability to thrive in diverse environments, particularly in the gastrointestinal tracts of humans and animals. The strain CFNIH9 is noted for having four replicons, indicating a complex genomic structure that may facilitate genetic variation and adaptability. The genetic information of this strain can be referenced through multiple accessions: NZ_CP026241.1, NZ_CP026238.1, NZ_CP026240.1, and NZ_CP026242.1. These accessions provide detailed genomic data that can be crucial for understanding the strain's characteristics and potential applications in microbiology. In terms of ecological significance, members of the Citrobacter freundii complex are known to play a role in the nitrogen cycle and can contribute to soil and water ecosystems. Their presence in various habitats, including both pathogenic and non-pathogenic contexts, underscores their versatility and adaptability. Understanding the traits of CFNIH9 can provide insights into its ecological roles, its interactions with other microorganisms, and its potential impacts on health and the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii complex sp. CFNIH9
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii complex sp. CFNIH9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-1cb6,

Gene Summary

Adenine Count

15532 bp

Thymine Count

16555 bp

Guanine Count

14550 bp

Cytosine Count

15200 bp

Genome Length

61837 bp

Protein-coding Genes

69 genes

Non-Coding Genes

15 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
porin ompcC2U43_RS17635Not AvailableNegative3432671 - 343378640752.7
phosphotransferase rcsdC2U43_RS17640Not AvailablePositive3434523 - 343719299933.5
response regulator transcription factor rcsbC2U43_RS17645Not AvailablePositive3437209 - 343785923719.1
two-component system sensor histidine kinase rcscC2U43_RS17650Not AvailableNegative3437978 - 3440824106193.0
dna topoisomerase (atp-hydrolyzing) subunit aC2U43_RS17655Not AvailableNegative3440946 - 344358597148.0
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigC2U43_RS17660Not AvailablePositive3443744 - 344447226996.6
class 1a ribonucleoside-diphosphate reductase subunit alphaC2U43_RS17665Not AvailablePositive3444892 - 344717785696.8
class ia ribonucleoside-diphosphate reductase subunit betaC2U43_RS17670Not AvailablePositive3447288 - 344841843508.8
ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfaeC2U43_RS17675Not AvailablePositive3448418 - 34486729306.22
mfs transporterC2U43_RS17680Not AvailableNegative3448676 - 344986642847.1

Displaying genes 3511 – 3520 of 5586 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.