Citrobacter freundii complex sp. CFNIH9

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii complex sp. CFNIH9 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This organism is part of the Citrobacter genus, known for its ability to thrive in diverse environments, particularly in the gastrointestinal tracts of humans and animals. The strain CFNIH9 is noted for having four replicons, indicating a complex genomic structure that may facilitate genetic variation and adaptability. The genetic information of this strain can be referenced through multiple accessions: NZ_CP026241.1, NZ_CP026238.1, NZ_CP026240.1, and NZ_CP026242.1. These accessions provide detailed genomic data that can be crucial for understanding the strain's characteristics and potential applications in microbiology. In terms of ecological significance, members of the Citrobacter freundii complex are known to play a role in the nitrogen cycle and can contribute to soil and water ecosystems. Their presence in various habitats, including both pathogenic and non-pathogenic contexts, underscores their versatility and adaptability. Understanding the traits of CFNIH9 can provide insights into its ecological roles, its interactions with other microorganisms, and its potential impacts on health and the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii complex sp. CFNIH9
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii complex sp. CFNIH9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-1cb6,

Gene Summary

Adenine Count

15532 bp

Thymine Count

16555 bp

Guanine Count

14550 bp

Cytosine Count

15200 bp

Genome Length

61837 bp

Protein-coding Genes

69 genes

Non-Coding Genes

15 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent methyltransferaseC2U43_RS14075Not AvailablePositive2785787 - 278659931075.1
modd proteinC2U43_RS14080Not AvailablePositive2786596 - 278745330287.5
tonb-dependent receptor plug domain-containing proteinC2U43_RS14085Not AvailablePositive2787477 - 278944773243.5
glsb/yeaq/ymge family stress response membrane proteinC2U43_RS14090Not AvailableNegative2789489 - 27897438627.12
flagellar brake protein ycgrC2U43_RS14095Not AvailablePositive2789945 - 279067927799.6
membrane-bound lytic murein transglycosylase emtaC2U43_RS14100Not AvailableNegative2790691 - 279130222216.8
muramoyltetrapeptide carboxypeptidaseC2U43_RS14105Not AvailablePositive2791401 - 279231533059.6
potassium/proton antiporterC2U43_RS14110Not AvailablePositive2792413 - 279414362005.9
catabolic alanine racemase dadxC2U43_RS14115Not AvailableNegative2794248 - 279531838844.8
d-amino acid dehydrogenaseC2U43_RS14120Not AvailableNegative2795331 - 279662947456.0

Displaying genes 3001 – 3010 of 5586 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.