Citrobacter freundii complex sp. CFNIH9

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii complex sp. CFNIH9 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This organism is part of the Citrobacter genus, known for its ability to thrive in diverse environments, particularly in the gastrointestinal tracts of humans and animals. The strain CFNIH9 is noted for having four replicons, indicating a complex genomic structure that may facilitate genetic variation and adaptability. The genetic information of this strain can be referenced through multiple accessions: NZ_CP026241.1, NZ_CP026238.1, NZ_CP026240.1, and NZ_CP026242.1. These accessions provide detailed genomic data that can be crucial for understanding the strain's characteristics and potential applications in microbiology. In terms of ecological significance, members of the Citrobacter freundii complex are known to play a role in the nitrogen cycle and can contribute to soil and water ecosystems. Their presence in various habitats, including both pathogenic and non-pathogenic contexts, underscores their versatility and adaptability. Understanding the traits of CFNIH9 can provide insights into its ecological roles, its interactions with other microorganisms, and its potential impacts on health and the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii complex sp. CFNIH9
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii complex sp. CFNIH9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-1cb6,

Gene Summary

Adenine Count

15532 bp

Thymine Count

16555 bp

Guanine Count

14550 bp

Cytosine Count

15200 bp

Genome Length

61837 bp

Protein-coding Genes

69 genes

Non-Coding Genes

15 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
emmdr/yeeo family multidrug/toxin efflux mate transporterC2U43_RS09850Not AvailableNegative1958639 - 196012653932.3
Trna-asnNot AvailableNot AvailablePositive1960287 - 1960362Not Available
phenylacetic acid degradation bifunctional protein paazC2U43_RS09860Not AvailableNegative1960445 - 196249073207.8
1,2-phenylacetyl-coa epoxidase subunit paaaC2U43_RS09865Not AvailablePositive1962776 - 196370535214.8
1,2-phenylacetyl-coa epoxidase subunit paabC2U43_RS09870Not AvailablePositive1963716 - 196400310950.8
1,2-phenylacetyl-coa epoxidase subunit paacC2U43_RS09875Not AvailablePositive1964011 - 196476628164.6
1,2-phenylacetyl-coa epoxidase subunit paadC2U43_RS09880Not AvailablePositive1964779 - 196527618350.0
1,2-phenylacetyl-coa epoxidase subunit paaeC2U43_RS09885Not AvailablePositive1965284 - 196635438748.1
2,3-dehydroadipyl-coa hydratase paafC2U43_RS09890Not AvailablePositive1966351 - 196711827299.9
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paagC2U43_RS09895Not AvailablePositive1967121 - 196790928384.2

Displaying genes 2251 – 2260 of 5586 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.