Citrobacter freundii complex sp. CFNIH9

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii complex sp. CFNIH9 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This organism is part of the Citrobacter genus, known for its ability to thrive in diverse environments, particularly in the gastrointestinal tracts of humans and animals. The strain CFNIH9 is noted for having four replicons, indicating a complex genomic structure that may facilitate genetic variation and adaptability. The genetic information of this strain can be referenced through multiple accessions: NZ_CP026241.1, NZ_CP026238.1, NZ_CP026240.1, and NZ_CP026242.1. These accessions provide detailed genomic data that can be crucial for understanding the strain's characteristics and potential applications in microbiology. In terms of ecological significance, members of the Citrobacter freundii complex are known to play a role in the nitrogen cycle and can contribute to soil and water ecosystems. Their presence in various habitats, including both pathogenic and non-pathogenic contexts, underscores their versatility and adaptability. Understanding the traits of CFNIH9 can provide insights into its ecological roles, its interactions with other microorganisms, and its potential impacts on health and the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii complex sp. CFNIH9
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii complex sp. CFNIH9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-1cb6,

Gene Summary

Adenine Count

15532 bp

Thymine Count

16555 bp

Guanine Count

14550 bp

Cytosine Count

15200 bp

Genome Length

61837 bp

Protein-coding Genes

69 genes

Non-Coding Genes

15 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific tyrosine recombinase xerdC2U43_RS04610Not AvailablePositive909189 - 91008534170.1
bifunctional protein-disulfide isomerase/oxidoreductase dsbcC2U43_RS04615Not AvailablePositive910109 - 91082225908.4
single-stranded-dna-specific exonuclease recjC2U43_RS04620Not AvailablePositive910828 - 91256163154.2
peptide chain release factor 2C2U43_RS04625Not AvailablePositive912653 - 91375141210.0
lysine--trna ligaseC2U43_RS04630Not AvailablePositive913761 - 91527857688.7
isopentenyl-diphosphate delta-isomeraseC2U43_RS04635Not AvailableNegative915356 - 91591020733.6
amidase activator actsC2U43_RS04640Not AvailablePositive916077 - 91683526607.9
Trna-glyNot AvailableNot AvailablePositive916915 - 916988Not Available
tyrosine-type recombinase/integraseC2U43_RS04650Not AvailablePositive917153 - 91834345627.2
is3-like element issen4 family transposaseC2U43_RS04655Not AvailableNegative918370 - 91949043124.9

Displaying genes 1331 – 1340 of 5586 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.