Citrobacter freundii complex sp. CFNIH9

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii complex sp. CFNIH9 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This organism is part of the Citrobacter genus, known for its ability to thrive in diverse environments, particularly in the gastrointestinal tracts of humans and animals. The strain CFNIH9 is noted for having four replicons, indicating a complex genomic structure that may facilitate genetic variation and adaptability. The genetic information of this strain can be referenced through multiple accessions: NZ_CP026241.1, NZ_CP026238.1, NZ_CP026240.1, and NZ_CP026242.1. These accessions provide detailed genomic data that can be crucial for understanding the strain's characteristics and potential applications in microbiology. In terms of ecological significance, members of the Citrobacter freundii complex are known to play a role in the nitrogen cycle and can contribute to soil and water ecosystems. Their presence in various habitats, including both pathogenic and non-pathogenic contexts, underscores their versatility and adaptability. Understanding the traits of CFNIH9 can provide insights into its ecological roles, its interactions with other microorganisms, and its potential impacts on health and the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii complex sp. CFNIH9
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii complex sp. CFNIH9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-1cb6,

Gene Summary

Adenine Count

15532 bp

Thymine Count

16555 bp

Guanine Count

14550 bp

Cytosine Count

15200 bp

Genome Length

61837 bp

Protein-coding Genes

69 genes

Non-Coding Genes

15 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system contractile sheath small subunitC2U43_RS04180Not AvailablePositive823804 - 82431018249.9
type vi secretion system contractile sheath large subunitC2U43_RS04185Not AvailablePositive824330 - 82581155462.7
type vi secretion system baseplate subunit tsseC2U43_RS04190Not AvailablePositive825817 - 82623916154.1
type vi secretion system baseplate subunit tssfC2U43_RS04195Not AvailablePositive826245 - 82807769856.2
type vi secretion system baseplate subunit tssgC2U43_RS04200Not AvailablePositive828044 - 82908739104.9
type vi secretion system-associated fha domain protein taghC2U43_RS04205Not AvailablePositive829104 - 83039047201.1
type vi secretion system lipoprotein tssjC2U43_RS04210Not AvailablePositive830387 - 83092019781.7
type vi secretion system baseplate subunit tsskC2U43_RS04215Not AvailablePositive830923 - 83226649691.7
type ivb secretion system protein icmh/dotuC2U43_RS04220Not AvailablePositive832270 - 83307930860.4
type vi secretion system atpase tsshC2U43_RS04225Not AvailablePositive833091 - 835829100053.0

Displaying genes 1251 – 1260 of 5586 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.