Citrobacter freundii complex sp. CFNIH4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii complex sp. CFNIH4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses flagella, which contribute to its motility. The genetic structure of CFNIH4 includes three replicons, indicating a complex genomic organization that may facilitate adaptability and survival in various environments. The presence of multiple replicons in CFNIH4 can be significant for its genetic diversity and potential for horizontal gene transfer. This trait is commonly associated with bacteria that can acquire new functions, such as antibiotic resistance or metabolic capabilities, which may enhance their ecological niche. The specific accessions associated with CFNIH4 are NZ_CP026232.1, NZ_CP026231.1, and NZ_CP026234.1. These accession numbers provide a reference for researchers looking to study the genomic features and evolutionary relationships of this bacterium within the Citrobacter genus. Understanding the traits of Citrobacter freundii complex sp. CFNIH4 can shed light on its potential ecological roles, particularly in diverse environments such as soils, water, and the gastrointestinal tracts of animals. Its motility, facilitated by flagella, may allow it to navigate through these environments effectively, potentially impacting nutrient cycling and interactions with other microorganisms. Overall, the characteristics of CFNIH4 highlight its adaptability and underscore the complexity of microbial communities in which it may participate.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii complex sp. CFNIH4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii complex sp. CFNIH4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii complex sp. CFNIH4 plasmid pKPC-c9fd,

Gene Summary

Adenine Count

14829 bp

Thymine Count

14451 bp

Guanine Count

16389 bp

Cytosine Count

16921 bp

Genome Length

62590 bp

Protein-coding Genes

71 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class c beta-lactamase cmy-152C2U41_RS24980Not AvailableNegative4898555 - 489970042031.6
lysr family transcriptional regulator amprC2U41_RS24985Not AvailablePositive4899832 - 490070732495.2
fumarate reductase subunit frddC2U41_RS24990Not AvailableNegative4900750 - 490110613046.6
fumarate reductase subunit frdcC2U41_RS24995Not AvailableNegative4901117 - 490151214880.8
fumarate reductase iron-sulfur proteinC2U41_RS25000Not AvailableNegative4901523 - 490225727158.5
fumarate reductase (quinol) flavoprotein subunitC2U41_RS25005Not AvailableNegative4902250 - 490404065412.8
elongation factor p--(r)-beta-lysine ligaseC2U41_RS25010Not AvailablePositive4904365 - 490534236995.1
glutamate/gamma-aminobutyrate family transporter yjemC2U41_RS25015Not AvailablePositive4905557 - 490705954672.0
miniconductance mechanosensitive channel mscmC2U41_RS25020Not AvailableNegative4907125 - 4910439123176.0
archaetidylserine decarboxylaseC2U41_RS25025Not AvailableNegative4910457 - 491142536103.6

Displaying genes 4891 – 4900 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.