Citrobacter freundii complex sp. CFNIH4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii complex sp. CFNIH4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses flagella, which contribute to its motility. The genetic structure of CFNIH4 includes three replicons, indicating a complex genomic organization that may facilitate adaptability and survival in various environments. The presence of multiple replicons in CFNIH4 can be significant for its genetic diversity and potential for horizontal gene transfer. This trait is commonly associated with bacteria that can acquire new functions, such as antibiotic resistance or metabolic capabilities, which may enhance their ecological niche. The specific accessions associated with CFNIH4 are NZ_CP026232.1, NZ_CP026231.1, and NZ_CP026234.1. These accession numbers provide a reference for researchers looking to study the genomic features and evolutionary relationships of this bacterium within the Citrobacter genus. Understanding the traits of Citrobacter freundii complex sp. CFNIH4 can shed light on its potential ecological roles, particularly in diverse environments such as soils, water, and the gastrointestinal tracts of animals. Its motility, facilitated by flagella, may allow it to navigate through these environments effectively, potentially impacting nutrient cycling and interactions with other microorganisms. Overall, the characteristics of CFNIH4 highlight its adaptability and underscore the complexity of microbial communities in which it may participate.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii complex sp. CFNIH4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii complex sp. CFNIH4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii complex sp. CFNIH4 plasmid pKPC-c9fd,

Gene Summary

Adenine Count

14829 bp

Thymine Count

14451 bp

Guanine Count

16389 bp

Cytosine Count

16921 bp

Genome Length

62590 bp

Protein-coding Genes

71 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid asymmetry maintenance abc transporter permease subunit mlaeC2U41_RS19615Not AvailableNegative3830558 - 383134027837.0
phospholipid abc transporter atp-binding protein mlafC2U41_RS19620Not AvailableNegative3831360 - 383216028820.4
calcium/sodium antiporterC2U41_RS19625Not AvailablePositive3832376 - 383335334641.0
arabinose-5-phosphate isomerase kdsdC2U41_RS19630Not AvailablePositive3833367 - 383435334931.9
3-deoxy-manno-octulosonate-8-phosphatase kdscC2U41_RS19635Not AvailablePositive3834374 - 383494019912.2
lps export abc transporter periplasmic protein lptcC2U41_RS19640Not AvailablePositive3834937 - 383551221697.8
lipopolysaccharide abc transporter substrate-binding protein lptaC2U41_RS19645Not AvailablePositive3835481 - 383602919746.6
lps export abc transporter atp-binding proteinC2U41_RS19650Not AvailablePositive3836036 - 383676126830.4
rna polymerase factor sigma-54C2U41_RS19655Not AvailablePositive3836808 - 383824153935.8
ribosome hibernation promoting factorC2U41_RS19660Not AvailablePositive3838264 - 383855110806.0

Displaying genes 3911 – 3920 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.