Citrobacter freundii complex sp. CFNIH4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii complex sp. CFNIH4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses flagella, which contribute to its motility. The genetic structure of CFNIH4 includes three replicons, indicating a complex genomic organization that may facilitate adaptability and survival in various environments. The presence of multiple replicons in CFNIH4 can be significant for its genetic diversity and potential for horizontal gene transfer. This trait is commonly associated with bacteria that can acquire new functions, such as antibiotic resistance or metabolic capabilities, which may enhance their ecological niche. The specific accessions associated with CFNIH4 are NZ_CP026232.1, NZ_CP026231.1, and NZ_CP026234.1. These accession numbers provide a reference for researchers looking to study the genomic features and evolutionary relationships of this bacterium within the Citrobacter genus. Understanding the traits of Citrobacter freundii complex sp. CFNIH4 can shed light on its potential ecological roles, particularly in diverse environments such as soils, water, and the gastrointestinal tracts of animals. Its motility, facilitated by flagella, may allow it to navigate through these environments effectively, potentially impacting nutrient cycling and interactions with other microorganisms. Overall, the characteristics of CFNIH4 highlight its adaptability and underscore the complexity of microbial communities in which it may participate.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii complex sp. CFNIH4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii complex sp. CFNIH4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii complex sp. CFNIH4 plasmid pKPC-c9fd,

Gene Summary

Adenine Count

14829 bp

Thymine Count

14451 bp

Guanine Count

16389 bp

Cytosine Count

16921 bp

Genome Length

62590 bp

Protein-coding Genes

71 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phea operon leader peptide phelC2U41_RS15765Not AvailablePositive3075738 - 30757851886.4
bifunctional chorismate mutase/prephenate dehydrataseC2U41_RS15770Not AvailablePositive3075885 - 307704542944.6
bifunctional chorismate mutase/prephenate dehydrogenaseC2U41_RS15775Not AvailableNegative3077142 - 307826341927.7
3-deoxy-7-phosphoheptulonate synthase arofC2U41_RS15780Not AvailableNegative3078274 - 307934438893.3
duf2799 domain-containing proteinC2U41_RS15785Not AvailablePositive3079559 - 307993313872.2
yfir family proteinC2U41_RS15790Not AvailablePositive3080092 - 308061019047.2
tyrosine phenol-lyaseC2U41_RS15795Not AvailablePositive3080603 - 30808278304.36
is3 family transposaseC2U41_RS15800Not AvailableNegative3080853 - 308200045063.9
tyrosine phenol-lyaseC2U41_RS15805Not AvailablePositive3082063 - 308306137485.6
ompa family proteinC2U41_RS15810Not AvailablePositive3083074 - 308355617479.9

Displaying genes 3211 – 3220 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.