Citrobacter freundii complex sp. CFNIH4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii complex sp. CFNIH4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses flagella, which contribute to its motility. The genetic structure of CFNIH4 includes three replicons, indicating a complex genomic organization that may facilitate adaptability and survival in various environments. The presence of multiple replicons in CFNIH4 can be significant for its genetic diversity and potential for horizontal gene transfer. This trait is commonly associated with bacteria that can acquire new functions, such as antibiotic resistance or metabolic capabilities, which may enhance their ecological niche. The specific accessions associated with CFNIH4 are NZ_CP026232.1, NZ_CP026231.1, and NZ_CP026234.1. These accession numbers provide a reference for researchers looking to study the genomic features and evolutionary relationships of this bacterium within the Citrobacter genus. Understanding the traits of Citrobacter freundii complex sp. CFNIH4 can shed light on its potential ecological roles, particularly in diverse environments such as soils, water, and the gastrointestinal tracts of animals. Its motility, facilitated by flagella, may allow it to navigate through these environments effectively, potentially impacting nutrient cycling and interactions with other microorganisms. Overall, the characteristics of CFNIH4 highlight its adaptability and underscore the complexity of microbial communities in which it may participate.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii complex sp. CFNIH4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii complex sp. CFNIH4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii complex sp. CFNIH4 plasmid pKPC-c9fd,

Gene Summary

Adenine Count

14829 bp

Thymine Count

14451 bp

Guanine Count

16389 bp

Cytosine Count

16921 bp

Genome Length

62590 bp

Protein-coding Genes

71 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hth-type transcriptional regulator galsC2U41_RS13315Not AvailableNegative2577363 - 257838836973.8
duf418 domain-containing protein yeibC2U41_RS13320Not AvailableNegative2578533 - 257969043572.4
gtp cyclohydrolase i foleC2U41_RS13325Not AvailableNegative2579705 - 258037324879.1
s-formylglutathione hydrolaseC2U41_RS13335Not AvailablePositive2580696 - 258153231212.9
helix-turn-helix domain-containing proteinC2U41_RS13340Not AvailableNegative2581533 - 258192214493.3
tyrosine phenol-lyaseC2U41_RS13345Not AvailableNegative2581912 - 258328249328.4
phosphoserine phosphatase serbC2U41_RS13350Not AvailablePositive2583499 - 258438633269.3
mfs transporterC2U41_RS13355Not AvailablePositive2584418 - 258574048605.3
ligand-gated channel proteinC2U41_RS13360Not AvailablePositive2586074 - 258805973161.9
lysine-specific permeaseC2U41_RS13365Not AvailableNegative2588124 - 258959353657.1

Displaying genes 2801 – 2810 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.