Citrobacter freundii complex sp. CFNIH4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii complex sp. CFNIH4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses flagella, which contribute to its motility. The genetic structure of CFNIH4 includes three replicons, indicating a complex genomic organization that may facilitate adaptability and survival in various environments. The presence of multiple replicons in CFNIH4 can be significant for its genetic diversity and potential for horizontal gene transfer. This trait is commonly associated with bacteria that can acquire new functions, such as antibiotic resistance or metabolic capabilities, which may enhance their ecological niche. The specific accessions associated with CFNIH4 are NZ_CP026232.1, NZ_CP026231.1, and NZ_CP026234.1. These accession numbers provide a reference for researchers looking to study the genomic features and evolutionary relationships of this bacterium within the Citrobacter genus. Understanding the traits of Citrobacter freundii complex sp. CFNIH4 can shed light on its potential ecological roles, particularly in diverse environments such as soils, water, and the gastrointestinal tracts of animals. Its motility, facilitated by flagella, may allow it to navigate through these environments effectively, potentially impacting nutrient cycling and interactions with other microorganisms. Overall, the characteristics of CFNIH4 highlight its adaptability and underscore the complexity of microbial communities in which it may participate.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii complex sp. CFNIH4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii complex sp. CFNIH4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii complex sp. CFNIH4 plasmid pKPC-c9fd,

Gene Summary

Adenine Count

14829 bp

Thymine Count

14451 bp

Guanine Count

16389 bp

Cytosine Count

16921 bp

Genome Length

62590 bp

Protein-coding Genes

71 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ydbh family proteinC2U41_RS09680Not AvailableNegative1895828 - 189846797149.7
2-hydroxyacid dehydrogenaseC2U41_RS09690Not AvailablePositive1899083 - 190007236515.9
heat shock protein hsljC2U41_RS09695Not AvailablePositive1900185 - 190060415146.6
duf333 domain-containing proteinC2U41_RS09700Not AvailableNegative1900618 - 19008848745.49
pyruvate:ferredoxin (flavodoxin) oxidoreductaseC2U41_RS09705Not AvailablePositive1901159 - 1904683128638.0
porin ompcC2U41_RS09710Not AvailablePositive1905050 - 190620441945.9
ktsc domain-containing proteinC2U41_RS09715Not AvailablePositive1906350 - 19065628072.78
universal stress protein uspfC2U41_RS09720Not AvailablePositive1906644 - 190707815804.2
trna 2-thiocytidine(32) synthetase ttcaC2U41_RS09725Not AvailablePositive1907277 - 190821235390.7
atp-dependent rna helicase dbpaC2U41_RS09730Not AvailableNegative1908306 - 190967949239.7

Displaying genes 2211 – 2220 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.