Photorhabdus sp. S8-52

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S8-52 is a gram-negative, rod-shaped bacterium notable for its possession of flagella, which contribute to its motility. This species is characterized by having a single replicon, indicating a streamlined genomic organization that can influence its adaptability and survival in various environments. The accession number NSCL00000000.1 provides a reference for researchers looking to explore genomic data related to this strain. The unique traits of Photorhabdus sp. S8-52 suggest that it may play a role in ecological interactions, particularly in association with nematodes, as many species within the Photorhabdus genus are known to be symbiotic with entomopathogenic nematodes. This symbiosis enables the bacteria to exploit insect hosts, facilitating their own growth while providing the nematodes with a nutrient source. Understanding the characteristics of Photorhabdus sp. S8-52 can deepen insights into microbial ecology, particularly in the context of its interactions with other organisms and its potential applications in biocontrol strategies against pests. The presence of flagella may enhance its ability to navigate through complex environments, allowing it to establish its ecological niche effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S8-52
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S8-52
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S8-52 S8_52_scf0194, whole genome shotgun

Gene Summary

Adenine Count

1535907 bp

Thymine Count

1525869 bp

Guanine Count

1131107 bp

Cytosine Count

1126768 bp

Genome Length

5320079 bp

Protein-coding Genes

4202 genes

Non-Coding Genes

415 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferaseCKY04_00250Not AvailablePositive43756 - 4573874507.3
4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylaseCKY04_00255Not AvailablePositive45738 - 4663133510.6
lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferaseCKY04_00260Not AvailablePositive46639 - 4830064044.0
4-amino-4-deoxy-l-arabinose-phospho-udp flippaseCKY04_00265Not AvailablePositive48297 - 4863812707.5
4-amino-4-deoxy-l-arabinose-phospho-udp flippaseCKY04_00270Not AvailablePositive48635 - 4901514449.4
endopeptidaseCKY04_00275Not AvailablePositive49121 - 4960618223.2
hypothetical proteinCKY04_00285Not AvailablePositive50508 - 506937147.66
flagellar protein flheCKY04_00290Not AvailableNegative50770 - 5119215214.5
abc transporter atp-binding proteinCKY04_00295Not AvailablePositive51517 - 5224526859.5
abc transporter permeaseCKY04_00300Not AvailablePositive52238 - 5345243053.1

Displaying genes 431 – 440 of 4617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.