Photorhabdus sp. S8-52

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S8-52 is a gram-negative, rod-shaped bacterium notable for its possession of flagella, which contribute to its motility. This species is characterized by having a single replicon, indicating a streamlined genomic organization that can influence its adaptability and survival in various environments. The accession number NSCL00000000.1 provides a reference for researchers looking to explore genomic data related to this strain. The unique traits of Photorhabdus sp. S8-52 suggest that it may play a role in ecological interactions, particularly in association with nematodes, as many species within the Photorhabdus genus are known to be symbiotic with entomopathogenic nematodes. This symbiosis enables the bacteria to exploit insect hosts, facilitating their own growth while providing the nematodes with a nutrient source. Understanding the characteristics of Photorhabdus sp. S8-52 can deepen insights into microbial ecology, particularly in the context of its interactions with other organisms and its potential applications in biocontrol strategies against pests. The presence of flagella may enhance its ability to navigate through complex environments, allowing it to establish its ecological niche effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S8-52
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S8-52
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S8-52 S8_52_scf0194, whole genome shotgun

Gene Summary

Adenine Count

1535907 bp

Thymine Count

1525869 bp

Guanine Count

1131107 bp

Cytosine Count

1126768 bp

Genome Length

5320079 bp

Protein-coding Genes

4202 genes

Non-Coding Genes

415 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-3CKY04_00200Not AvailablePositive34273 - 3481220450.1
50s ribosomal protein l35CKY04_00205Not AvailablePositive34910 - 351077288.35
50s ribosomal protein l20CKY04_00210Not AvailablePositive35149 - 3550513512.7
phenylalanine--trna ligase subunit alphaCKY04_00215Not AvailablePositive35947 - 3693037257.4
phenylalanine--trna ligase subunit betaCKY04_00220Not AvailablePositive36946 - 3933387867.9
integration host factor subunit alphaCKY04_00225Not AvailablePositive39338 - 3963411220.5
vitamin b12 abc transporter permease btucCKY04_00230Not AvailablePositive39700 - 4070737107.5
vitamin b12 abc transporter atp-binding protein btudCKY04_00235Not AvailablePositive40742 - 4149427767.9
udp-4-amino-4-deoxy-l-arabinose aminotransferaseCKY04_00240Not AvailablePositive41632 - 4277742543.3
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseCKY04_00245Not AvailablePositive42778 - 4375536552.7

Displaying genes 421 – 430 of 4617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.