Photorhabdus sp. S8-52

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S8-52 is a gram-negative, rod-shaped bacterium notable for its possession of flagella, which contribute to its motility. This species is characterized by having a single replicon, indicating a streamlined genomic organization that can influence its adaptability and survival in various environments. The accession number NSCL00000000.1 provides a reference for researchers looking to explore genomic data related to this strain. The unique traits of Photorhabdus sp. S8-52 suggest that it may play a role in ecological interactions, particularly in association with nematodes, as many species within the Photorhabdus genus are known to be symbiotic with entomopathogenic nematodes. This symbiosis enables the bacteria to exploit insect hosts, facilitating their own growth while providing the nematodes with a nutrient source. Understanding the characteristics of Photorhabdus sp. S8-52 can deepen insights into microbial ecology, particularly in the context of its interactions with other organisms and its potential applications in biocontrol strategies against pests. The presence of flagella may enhance its ability to navigate through complex environments, allowing it to establish its ecological niche effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S8-52
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S8-52
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S8-52 S8_52_scf0194, whole genome shotgun

Gene Summary

Adenine Count

1535907 bp

Thymine Count

1525869 bp

Guanine Count

1131107 bp

Cytosine Count

1126768 bp

Genome Length

5320079 bp

Protein-coding Genes

4202 genes

Non-Coding Genes

415 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna topoisomerase i subunit omegaCKY04_20455Not AvailableNegative4608742 - 461134297419.4
epoxide hydrolaseCKY04_20465Not AvailableNegative4611997 - 461282729998.0
protease sohbCKY04_20470Not AvailableNegative4613231 - 461427738866.4
type a chloramphenicol o-acetyltransferaseCKY04_20475Not AvailableNegative4615026 - 461566424942.5
ycik family oxidoreductaseCKY04_20480Not AvailablePositive4615962 - 461672627496.2
cob(i)yrinic acid a,c-diamide adenosyltransferaseCKY04_20485Not AvailablePositive4616732 - 461732222295.7
23s rrna pseudouridine(2605) synthase rlubCKY04_20490Not AvailableNegative4617359 - 461829134772.0
is982 family transposaseCKY04_20505Not AvailableNegative4619937 - 46200483973.92
mfs transporterCKY04_20510Not AvailableNegative4620585 - 462209953864.0
hypothetical proteinCKY04_20515Not AvailableNegative4622276 - 462288123501.5

Displaying genes 4001 – 4010 of 4617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.