Photorhabdus sp. S8-52

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S8-52 is a gram-negative, rod-shaped bacterium notable for its possession of flagella, which contribute to its motility. This species is characterized by having a single replicon, indicating a streamlined genomic organization that can influence its adaptability and survival in various environments. The accession number NSCL00000000.1 provides a reference for researchers looking to explore genomic data related to this strain. The unique traits of Photorhabdus sp. S8-52 suggest that it may play a role in ecological interactions, particularly in association with nematodes, as many species within the Photorhabdus genus are known to be symbiotic with entomopathogenic nematodes. This symbiosis enables the bacteria to exploit insect hosts, facilitating their own growth while providing the nematodes with a nutrient source. Understanding the characteristics of Photorhabdus sp. S8-52 can deepen insights into microbial ecology, particularly in the context of its interactions with other organisms and its potential applications in biocontrol strategies against pests. The presence of flagella may enhance its ability to navigate through complex environments, allowing it to establish its ecological niche effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S8-52
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S8-52
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S8-52 S8_52_scf0194, whole genome shotgun

Gene Summary

Adenine Count

1535907 bp

Thymine Count

1525869 bp

Guanine Count

1131107 bp

Cytosine Count

1126768 bp

Genome Length

5320079 bp

Protein-coding Genes

4202 genes

Non-Coding Genes

415 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-dicitrate transporter subunit fecdCKY04_16700Not AvailableNegative3820424 - 382138034105.2
iron-dicitrate transporter permease subunitCKY04_16705Not AvailableNegative3821377 - 382237535451.8
fe(3+)-dicitrate abc transporter substrate-binding protein fecbCKY04_16710Not AvailableNegative3822372 - 382328033607.6
tonb-dependent siderophore receptorCKY04_16715Not AvailableNegative3823340 - 382570086956.4
iron dicitrate transport regulator fecrCKY04_16720Not AvailableNegative3825786 - 382675136233.2
rna polymerase subunit sigmaCKY04_16725Not AvailableNegative3826753 - 382727419770.0
hypothetical proteinCKY04_16735Not AvailableNegative3829164 - 382948112596.8
very short patch repair endonucleaseCKY04_16745Not AvailablePositive3830030 - 383050618443.8
dna (cytosine-5-)-methyltransferaseCKY04_16750Not AvailablePositive3830753 - 383185341640.8
restriction endonucleaseCKY04_16755Not AvailableNegative3832040 - 383304739168.9

Displaying genes 3341 – 3350 of 4617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.