Photorhabdus sp. S8-52

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S8-52 is a gram-negative, rod-shaped bacterium notable for its possession of flagella, which contribute to its motility. This species is characterized by having a single replicon, indicating a streamlined genomic organization that can influence its adaptability and survival in various environments. The accession number NSCL00000000.1 provides a reference for researchers looking to explore genomic data related to this strain. The unique traits of Photorhabdus sp. S8-52 suggest that it may play a role in ecological interactions, particularly in association with nematodes, as many species within the Photorhabdus genus are known to be symbiotic with entomopathogenic nematodes. This symbiosis enables the bacteria to exploit insect hosts, facilitating their own growth while providing the nematodes with a nutrient source. Understanding the characteristics of Photorhabdus sp. S8-52 can deepen insights into microbial ecology, particularly in the context of its interactions with other organisms and its potential applications in biocontrol strategies against pests. The presence of flagella may enhance its ability to navigate through complex environments, allowing it to establish its ecological niche effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S8-52
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S8-52
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S8-52 S8_52_scf0194, whole genome shotgun

Gene Summary

Adenine Count

1535907 bp

Thymine Count

1525869 bp

Guanine Count

1131107 bp

Cytosine Count

1126768 bp

Genome Length

5320079 bp

Protein-coding Genes

4202 genes

Non-Coding Genes

415 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorCKY04_09100Not AvailableNegative2079661 - 208037726992.5
peptidylprolyl isomeraseCKY04_09105Not AvailablePositive2080648 - 208126822314.4
3'(2'),5'-bisphosphate nucleotidase cysqCKY04_09110Not AvailablePositive2081583 - 208232627608.0
ytfj family proteinCKY04_09115Not AvailableNegative2082423 - 208297720544.8
duf1107 domain-containing proteinCKY04_09120Not AvailablePositive2083268 - 20834748056.1
hypothetical proteinCKY04_09125Not AvailableNegative2083585 - 208491649549.3
peptide-methionine (s)-s-oxide reductaseCKY04_09130Not AvailableNegative2085071 - 208571824040.2
hypothetical proteinCKY04_09135Not AvailablePositive2085833 - 208757565252.2
translocation and assembly module tambCKY04_09140Not AvailablePositive2087572 - 2091345136412.0
gamma-glutamylcyclotransferaseCKY04_09145Not AvailablePositive2091348 - 209169513714.3

Displaying genes 1961 – 1970 of 4617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.