Mucilaginibacter rubeus str. P3

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter rubeus strain P3 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is noted for possessing a single replicon, which is an important aspect of its genetic structure. The genomic data for Mucilaginibacter rubeus str. P3 is cataloged under the accession number QFKV00000000.1, indicating that its genomic sequence is accessible for further research and analysis. The classification of Mucilaginibacter rubeus within the broader context of microbial taxonomy suggests its potential roles in various ecological niches. As a member of the Mucilaginibacter genus, it may be involved in processes such as organic matter decomposition or nutrient cycling in its environment. The specific traits of Mucilaginibacter rubeus str. P3, including its Gram-negative nature and rod shape, may contribute to its adaptability and interactions within microbial communities. Understanding the characteristics of Mucilaginibacter rubeus str. P3 can provide insights into its ecological functions and potential applications in biotechnology or environmental management. Its single replicon may also offer advantages in genetic studies and manipulation, paving the way for further exploration of its metabolic capabilities and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter rubeus
StrainP3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen; soil
Biotic relationshipNot Available
Host(s)Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter rubeus strain P3 D70275-07_R2_contig_107, whole

Gene Summary

Adenine Count

2036902 bp

Thymine Count

2040386 bp

Guanine Count

1522645 bp

Cytosine Count

1525861 bp

Genome Length

7125794 bp

Protein-coding Genes

6061 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-ribulose-5-phosphate 4-epimeraseDIU36_11580Not AvailableNegative2646335 - 264703326064.8
ribulokinaseDIU36_11585Not AvailableNegative2647041 - 264874761377.2
alpha/beta hydrolaseDIU36_11590Not AvailableNegative2649174 - 264995027490.1
epimeraseDIU36_11595Not AvailableNegative2650126 - 265080025088.9
asma family proteinDIU36_11600Not AvailablePositive2650943 - 265345392567.0
rna polymerase sigma factor rpod/sigaDIU36_11605Not AvailablePositive2653786 - 265464632264.7
pathogenicity locusDIU36_11610Not AvailableNegative2654875 - 265537218868.5
carbamoyl phosphate synthase small subunitDIU36_11615Not AvailableNegative2655497 - 265659740510.3
3-methyl-2-oxobutanoate hydroxymethyltransferaseDIU36_11620Not AvailablePositive2656949 - 265776429670.9
rlua family pseudouridine synthaseDIU36_11625Not AvailablePositive2657854 - 265857927409.2

Displaying genes 2341 – 2350 of 6137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.