Rhodococcus sp. 15-2388-1-1a

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. 15-2388-1-1a is characterized by the presence of flagella, which suggests motility capabilities that may facilitate its survival and colonization in various environments. This species contains a single replicon, indicating a streamlined genetic structure that could contribute to its adaptability and efficiency in resource utilization. The accession number for Rhodococcus sp. 15-2388-1-1a is NPFP00000000.1, which provides a reference for genetic and genomic studies associated with this strain. This information is crucial for researchers aiming to understand its specific metabolic pathways and potential applications in biotechnology or environmental microbiology. Biologically, the presence of flagella can enhance the organism's ability to navigate through diverse habitats, possibly aiding in its role in soil ecosystems or in bioremediation processes. Flagellated bacteria like Rhodococcus sp. are often involved in the degradation of complex organic compounds, suggesting that this species could play a significant role in nutrient cycling and the breakdown of pollutants in the environment. Understanding these traits is essential for harnessing the ecological potential of Rhodococcus sp. 15-2388-1-1a, particularly in applications aimed at environmental restoration or industrial biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. 15-2388-1-1a
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. 15-2388-1-1a RS1C5_64, whole genome shotgun

Gene Summary

Adenine Count

1103771 bp

Thymine Count

1103728 bp

Guanine Count

1999564 bp

Cytosine Count

2007277 bp

Genome Length

6214590 bp

Protein-coding Genes

5652 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-phosphosulfolactate phosphataseCH302_06115Not AvailableNegative1269673 - 127043726069.7
hypothetical proteinCH302_06120Not AvailablePositive1270504 - 127093515283.8
hypothetical proteinCH302_06125Not AvailableNegative1270941 - 12712169895.52
hypothetical proteinCH302_06130Not AvailablePositive1271317 - 127197021997.6
hypothetical proteinCH302_06135Not AvailablePositive1272050 - 127249915691.8
aquaporinCH302_06140Not AvailableNegative1272501 - 127321423297.0
nadh-quinone oxidoreductase subunit aCH302_06145Not AvailablePositive1273504 - 127386313275.5
nadh-quinone oxidoreductase subunit bCH302_06150Not AvailablePositive1273936 - 127449019867.6
nadh-quinone oxidoreductase subunit cCH302_06155Not AvailablePositive1274487 - 127514924456.7
nadh dehydrogenase subunit dCH302_06160Not AvailablePositive1275149 - 127644747826.6

Displaying genes 1341 – 1350 of 5818 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.