Nitrospira bacterium HGW-Nitrospira-1

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Family

Genus

Description

Nitrospira bacterium HGW-Nitrospira-1 is characterized by having a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in specific ecological niches. The organism is cataloged under the accession number PGYF00000000.1, which allows for its identification and retrieval from genomic databases for further study. This bacterium belongs to the Nitrospira genus, a group known for its role in the nitrogen cycle, particularly in the oxidation of nitrite to nitrate. This process is crucial for maintaining nitrogen balance in various ecosystems, including soil and aquatic environments. The presence of only one replicon may suggest a specialized adaptation that optimizes its metabolic capabilities, potentially enhancing its survival and functional efficiency in its habitat. Understanding the genomic characteristics of Nitrospira bacterium HGW-Nitrospira-1 can provide insights into its ecological role in nutrient cycling. As a nitrite-oxidizing bacterium, it may play a significant part in converting nitrite, which can be toxic at high concentrations, into nitrate, a form of nitrogen that is more readily utilized by plants. Consequently, the activities of Nitrospira species, including HGW-Nitrospira-1, are essential for promoting soil fertility and supporting plant growth, thereby influencing broader ecological interactions and nutrient dynamics within ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrospira bacterium HGW-Nitrospira-1


Gene Summary

Adenine Count

444099 bp

Thymine Count

450283 bp

Guanine Count

380243 bp

Cytosine Count

386363 bp

Genome Length

1664412 bp

Protein-coding Genes

1623 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s ribosomal rnaNot AvailableNot AvailablePositive8 - 2996Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive143 - 259Not Available
primosomal protein n'CVV37_00005Not AvailablePositive302 - 222172421.1
hypothetical proteinCVV37_00010Not AvailableNegative2531 - 27137090.74
Ncrna_class:otherNot AvailableNot AvailablePositive3065 - 3247Not Available
dephospho-coa kinaseCVV37_00015Not AvailableNegative2753 - 334622262.9
fmdb family transcriptional regulatorCVV37_00020Not AvailablePositive3448 - 373510442.6
16s ribosomal rnaNot AvailableNot AvailablePositive3498 - 4877Not Available
ap endonucleaseCVV37_00025Not AvailablePositive3732 - 449628975.0
acyloxyacyl hydrolaseCVV37_00030Not AvailablePositive4474 - 513024323.2

Displaying genes 1 – 10 of 1673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.