Nitrospira bacterium HGW-Nitrospira-1

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Family

Genus

Description

Nitrospira bacterium HGW-Nitrospira-1 is characterized by having a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in specific ecological niches. The organism is cataloged under the accession number PGYF00000000.1, which allows for its identification and retrieval from genomic databases for further study. This bacterium belongs to the Nitrospira genus, a group known for its role in the nitrogen cycle, particularly in the oxidation of nitrite to nitrate. This process is crucial for maintaining nitrogen balance in various ecosystems, including soil and aquatic environments. The presence of only one replicon may suggest a specialized adaptation that optimizes its metabolic capabilities, potentially enhancing its survival and functional efficiency in its habitat. Understanding the genomic characteristics of Nitrospira bacterium HGW-Nitrospira-1 can provide insights into its ecological role in nutrient cycling. As a nitrite-oxidizing bacterium, it may play a significant part in converting nitrite, which can be toxic at high concentrations, into nitrate, a form of nitrogen that is more readily utilized by plants. Consequently, the activities of Nitrospira species, including HGW-Nitrospira-1, are essential for promoting soil fertility and supporting plant growth, thereby influencing broader ecological interactions and nutrient dynamics within ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrospira bacterium HGW-Nitrospira-1

Gene Summary

Adenine Count

444099 bp

Thymine Count

450283 bp

Guanine Count

380243 bp

Cytosine Count

386363 bp

Genome Length

1664412 bp

Protein-coding Genes

1623 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseCVV37_03240Not AvailablePositive642067 - 64289430220.8
lps export abc transporter periplasmic protein lptcCVV37_03245Not AvailablePositive642965 - 64347718913.8
hypothetical proteinCVV37_03250Not AvailablePositive643452 - 64391917337.1
lps export abc transporter atp-binding proteinCVV37_03255Not AvailablePositive643919 - 64464126914.0
rna polymerase sigma-54 factorCVV37_03260Not AvailablePositive644642 - 64607855166.8
ribosomal subunit interface proteinCVV37_03265Not AvailablePositive646140 - 64666419721.7
rnase adapter rapzCVV37_03270Not AvailablePositive646697 - 64757232576.0
cbs domain-containing proteinCVV37_03275Not AvailablePositive647621 - 64805816077.7
hypothetical proteinCVV37_03280Not AvailableNegative648204 - 64860514924.1
b12-binding domain-containing radical sam proteinCVV37_03285Not AvailableNegative648967 - 65043055449.0

Displaying genes 641 – 650 of 1673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.