Nitrospira bacterium HGW-Nitrospira-1

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Family

Genus

Description

Nitrospira bacterium HGW-Nitrospira-1 is characterized by having a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in specific ecological niches. The organism is cataloged under the accession number PGYF00000000.1, which allows for its identification and retrieval from genomic databases for further study. This bacterium belongs to the Nitrospira genus, a group known for its role in the nitrogen cycle, particularly in the oxidation of nitrite to nitrate. This process is crucial for maintaining nitrogen balance in various ecosystems, including soil and aquatic environments. The presence of only one replicon may suggest a specialized adaptation that optimizes its metabolic capabilities, potentially enhancing its survival and functional efficiency in its habitat. Understanding the genomic characteristics of Nitrospira bacterium HGW-Nitrospira-1 can provide insights into its ecological role in nutrient cycling. As a nitrite-oxidizing bacterium, it may play a significant part in converting nitrite, which can be toxic at high concentrations, into nitrate, a form of nitrogen that is more readily utilized by plants. Consequently, the activities of Nitrospira species, including HGW-Nitrospira-1, are essential for promoting soil fertility and supporting plant growth, thereby influencing broader ecological interactions and nutrient dynamics within ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrospira bacterium HGW-Nitrospira-1

Gene Summary

Adenine Count

444099 bp

Thymine Count

450283 bp

Guanine Count

380243 bp

Cytosine Count

386363 bp

Genome Length

1664412 bp

Protein-coding Genes

1623 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCVV37_01800Not AvailableNegative342232 - 34287323203.3
tigr00159 family proteinCVV37_01805Not AvailableNegative342870 - 34363728136.0
rok family proteinCVV37_01810Not AvailablePositive343821 - 34477133485.7
elongation factor 4CVV37_01815Not AvailablePositive344772 - 34655966630.8
signal peptidase iCVV37_01820Not AvailablePositive346556 - 34718824052.4
hypothetical proteinCVV37_01825Not AvailablePositive347185 - 34755013916.0
riboflavin synthaseCVV37_01830Not AvailablePositive347551 - 34818622474.4
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiCVV37_01835Not AvailablePositive348140 - 34938445627.8
Trna-leuNot AvailableNot AvailablePositive349620 - 349705Not Available
efflux rnd transporter periplasmic adaptor subunitCVV37_01845Not AvailablePositive349763 - 35093842565.3

Displaying genes 361 – 370 of 1673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.