Flavobacterium sp. AJR

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. AJR is characterized as a rod-shaped bacterium, which is a defining feature of its morphology. This species possesses flagella, indicating that it is motile, allowing it to navigate its environment effectively. Flavobacterium sp. AJR has a single replicon, which is significant for understanding its genetic structure and replication process. The genomic information for Flavobacterium sp. AJR is cataloged under the accession NCWQ00000000.1. This accession number serves as a reference for researchers seeking to explore its genetic makeup and potential applications in various fields. Flavobacterium species are often associated with aquatic environments and play a crucial role in the degradation of organic matter. Their ability to break down complex organic compounds is essential in nutrient cycling within ecosystems. The motility provided by flagella can aid in the colonization of specific niches, enhancing their ecological role. In summary, Flavobacterium sp. AJR exhibits rod-shaped morphology, possesses flagella, and has a single replicon, with its genetic information available under a specific accession number. The ecological significance of this bacterium lies in its potential contributions to organic matter degradation in aquatic ecosystems, highlighting its role in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. AJR
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. AJR
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. AJR contig204, whole genome shotgun sequence.

Gene Summary

Adenine Count

1823939 bp

Thymine Count

1816109 bp

Guanine Count

884260 bp

Cytosine Count

871888 bp

Genome Length

5396196 bp

Protein-coding Genes

4604 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan-binding protein lysmB8T70_15485Not AvailableNegative3537975 - 353861924084.8
aminodeoxychorismate lyaseB8T70_15490Not AvailableNegative3539118 - 354015839728.0
gnat family n-acetyltransferaseB8T70_15495Not AvailableNegative3540219 - 354075220502.4
diaminopimelate epimeraseB8T70_15500Not AvailableNegative3540819 - 354160128846.9
serine proteaseB8T70_15505Not AvailablePositive3541739 - 354313950653.3
aldehyde dehydrogenaseB8T70_15510Not AvailablePositive3543378 - 354482653533.5
asnc family transcriptional regulatorB8T70_15515Not AvailableNegative3545074 - 354553517683.6
hypothetical proteinB8T70_15520Not AvailablePositive3545599 - 354704855587.0
glucosamine-6-phosphate deaminaseB8T70_15525Not AvailableNegative3547110 - 354903872308.4
glucose/galactose mfs transporterB8T70_15530Not AvailableNegative3549083 - 355046549804.8

Displaying genes 3091 – 3100 of 4684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.